Clinical AI Radar

2026-10-16

Machine learning evaluated on patients, from new PubMed records — not preprints.

172papers read
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13shortlisted
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8must-read

14 s · 176,982 input tokens · ≈ $0.0074 · jev-1.13.0 via typesafe

Must-read ≥ 95%

98%applicationpubmed

Prognostic value of platelet-to-white blood cell ratio in critically ill patients with non-traumatic subarachnoid hemorrhage: a machine learning-driven study of the public database and the hospital information system.

Liu L, Huang Z, Gui B et al. · Front Neurol

External validation 98%
Abstract

Background: Assessment of prognosis is crucial for managing non-traumatic subarachnoid hemorrhage (NSAH) patients. The study aimed to explore the association between platelet-to-white blood cell ratio (PWR) and all-cause mortality in this high-risk population and to develop machine learning models to improve prognostic accuracy. Methods: Using data from the Medical Information Mart for Intensive Care (MIMIC-IV). The observational endpoints were 30-day and 365-day mortality. Patients were categorized into four groups based on the quartiles of PWR. Kaplan-Meier curves, multivariate Cox regression analyses, restricted cubic splines (RCS), and subgroup analyses were applied. We also developed machine learning models that include PWR and clinical features selected with the Boruta and LASSO algorithms to predict 30-day mortality. Model performance was evaluated by the receiver operating characteristic (ROC) curve and the area under the curve (AUC). Shapley Additive exPlanations (SHAP) method was utilized to provide model interpretability. External validations in the eICU-Collaborative Research Database (eICU-CRD) and the Hospital Information System (HIS) of the First Affiliated Hospital of Harbin Medical University were used to assess generalizability. Results: A total of 1,176 patients with critically ill NSAH were enrolled from MIMIC-IV, predominantly male (58.8%), with a median age of 62 years. In multivariable Cox models, higher PWR quartiles were independently associated with lower risk of 30-day (HR = 0.55, 95% CI 0.35, 0.86, p = 0.009) and 365-day (HR = 0.53, 95% CI 0.37, 0.77, p = 0.001) mortality after fully adjusting. RCS suggested a linear association. No significant interaction was observed by subgroup analysis across all subgroups. The top-performing machine learning model attained an AUC of 0.868 during internal validation (MIMIC-IV). External validations yielded AUC values of 0.874 (eICU-CRD) and 0.763 (HIS). SHAP analysis revealed a correlation between decreased PWR and an elevated predicted risk of mortality. Conclusion: PWR is an independent predictor of short- and long-term mortality in ICU patients with NSAH. Machine learning models incorporating PWR significantly improve risk stratification, thereby providing precious support for the early identification and personalized management of patients in the ICU.

pubmed:42876490Useful?👍👎
98%applicationpubmed

Interpretable machine learning models to predict venous thromboembolism in sepsis patients with type 2 diabetes mellitus.

Ma L, Yu X, Xin Q · Front Endocrinol (Lausanne)

External validation 98%
Abstract

Background: Sepsis patients with type 2 diabetes mellitus (T2DM) face a substantially elevated risk of venous thromboembolism (VTE), yet prediction tools tailored for this population are lacking. This study aimed to develop and validate interpretable machine learning models for predicting in-hospital VTE in septic patients with T2DM. Methods: A total of 648 sepsis patients with T2DM admitted to Shaanxi Provincial People's Hospital between January 2020 and October 2024 were included in this retrospective cohort study, an internal validation cohort of 303 patients was retrospectively collected from Shaanxi Provincial People's Hospital between November 2024 and December 2025, and an independent external validation cohort of 260 patients was retrospectively collected from Xi'an No. 3 Hospital (a separate tertiary care center) between November 2023 and December 2025. Six machine learning algorithms-Logistic Regression, Support Vector Machine (SVM), Multilayer Perceptron (MLP), LightGBM, XGBoost, and Random Forest-were developed and compared. Feature selection was performed using the Boruta algorithm combined with forward sequential feature selection. Model performance was evaluated by discrimination (area under the receiver operating characteristic curve, AUC), calibration (calibratin plots and Brier scores), and clinical utility (decision curve analysis). Model interpretability was enhanced using SHAP analysis. Results: Among the 648 internal patients, 115 (17.7%) developed VTE. The Boruta algorithm and forward sequential feature selection identified five key predictors: D-dimer, C-reactive protein (CRP), activated partial thromboplastin time (APTT), international normalized ratio (INR), and fibrin degradation products (FDP). Among the six algorithms, LightGBM achieved the best overall performance, with an AUC of 0.9025 in the test set, 0.8048 in the internal validation cohort, and 0.8902 in the external validation cohort. Calibration curves demonstrated good agreement between predicted and observed outcomes, and decision curve analysis confirmed positive net clinical benefit across a wide range of threshold probabilities. SHAP analysis revealed that elevated D-dimer, CRP, INR, and FDP, together with shortened APTT, were the strongest drivers of VTE risk. Sensitivity analyses excluding D-dimer-driven cases, removing the D-dimer feature, and restricting to symptomatic VTE yielded consistent results (AUC range: 0.84-0.89). Conclusions: The LightGBM model incorporating five readily available coagulation and inflammatory markers accurately predicts in-hospital VTE in sepsis patients with T2DM, with robust discrimination, calibration, and clinical utility. SHAP-based interpretability enhances transparency and may facilitate personalized risk stratification and informed thromboprophylaxis decisions in this high-risk population.

pubmed:42876467Useful?👍👎
98%applicationpubmed

Habitat Radiomics and Machine Learning for Preoperative Three-class Classification of Pediatric Acute Appendicitis: A Dual-center Study with External Validation.

Li Z, Zhang Z, Li Y et al. · J Imaging Inform Med

External validation 98%
Abstract

Accurate preoperative differentiation of pediatric acute appendicitis subtypes is relevant to treatment planning. We developed and externally validated a machine-learning framework combining habitat-based computed tomography (CT) radiomics with clinical variables for three-class classification (simple, complex, and appendiceal abscess). This retrospective dual-center study included 317 children undergoing appendectomy at Institution A (training n = 222, internal validation n = 95) and 174 children at Institution B (external validation). K-means + + habitat segmentation (k = 3) of preoperative noncontrast CT volumes of interest yielded 1218 radiomic features; ten features selected on the training cohort were combined with 20 preoperative clinical variables. Eight classifiers were compared using macro-averaged one-versus-rest area under the receiver operating characteristic curve (AUC), accuracy, and macro-F1, with bootstrap confidence intervals (CIs), DeLong tests, calibration statistics, and decision curve analysis. In external validation, naive Bayes achieved the highest macro-AUC (0.946, 95% CI 0.910-0.974), accuracy 0.776 (0.713-0.833), and macro-F1 0.766 (0.674-0.837), significantly exceeding all seven comparators among the configurations evaluated (p < 0.001); the internal validation macro-AUC was 0.940 (0.893-0.977). Per-class external AUCs were 0.920 (simple), 0.948 (complex), and 0.971 (abscess). Calibration slopes (0.23-0.30) indicated that probability outputs require recalibration before probabilistic use. In a five-arm ablation of the input feature blocks, the fusion model combining clinical variables with habitat radiomics performed best (external macro-AUC 0.971), ahead of habitat radiomics alone (0.952), clinical variables plus conventional whole-VOI radiomics (0.776), clinical variables alone (0.763) and conventional whole-VOI radiomics alone (0.582). Habitat radiomics combined with machine learning provided accurate, externally validated three-class classification of pediatric acute appendicitis in children undergoing appendectomy. Naive Bayes offered the most balanced subtype discrimination. The model is a subtype-stratification aid rather than a stand-alone diagnostic or treatment-selection tool.

pubmed:42875693Useful?👍👎
97%empirical studypubmed

Diagnostic Performance of a Deep Learning Model Using Phonocardiogram and Single-Lead ECG Signals for Detecting Moderate-or-Greater Aortic Stenosis: Multicenter External Validation.

Saito S, Ishii M, Ogawa S et al. · Clin Cardiol

External validation 97%Prospective 45%
Abstract

Background: Valvular heart disease, particularly aortic stenosis (AS), often remains asymptomatic until advanced stages, making early detection challenging. Although cardiac auscultation is a traditional screening tool, its diagnostic accuracy is limited. We aimed to externally validate a deep learning-based model (eAS model) using phonocardiogram (PCG) and single-lead electrocardiogram (ECG) signals to detect moderate-or-greater AS. Methods: PCG and ECG recordings were acquired using a PCG device (Cardio-EGG). Transthoracic echocardiography served as the reference standard. The external validation cohort consisted of 951 patients from 3 medical institutions, including 70 with moderate-or-greater AS. The primary outcome was sensitivity for detecting moderate-or-greater AS; secondary outcomes included the area under the receiver operating characteristic curve (AUROC), specificity, predictive values, and likelihood ratios (LR). Results: The external validation cohort (n = 951, median age 73 years, male 65%) exhibited more advanced valvular disease than the training/development cohort. The eAS model achieved an AUROC of 0.9632 (95% CI: 0.9471-0.9774). Using the pre-determined threshold, sensitivity was 92.9% and specificity 87.9%, yielding a positive LR of 7.65 and negative LR of 0.08. Model-derived probabilities showed strong associations with echocardiographic measures of AS severity (adjusted R2 = 0.5051 for peak transvalvular velocity). Exploratory subgroup analyses showed generally consistent performance, although estimates were imprecise in small subgroups. Conclusion: The eAS model demonstrated high diagnostic performance for detecting moderate-or-greater AS in a multicenter external validation cohort. AI-based PCG/ECG analysis may support the decision to refer patients from auscultation to echocardiography for AS evaluation.

pubmed:42878095Useful?👍👎
97%applicationpubmed

Development and validation of a machine learning-based prediction model for anemia risk in patients with primary lung cancer receiving platinum-based chemotherapy: a multicenter study.

Zhang K, Li X, Zhang X et al. · Front Oncol

External validation 97%
Abstract

Background: Anemia represents a frequent and clinically burdensome complication in patients with primary lung cancer receiving platinum-based regimens, yet robust risk stratification tools that integrate multidimensional clinical data and undergo external validation remain scarce. This multicenter study sought to develop and externally validate a machine learning-based predictive model for CIA in this population. Methods: A total of 3,434 patients with primary lung cancer were retrospectively enrolled from two geographically distinct institutions, with 3,097 assigned to the training/internal validation set (7:3 split) and 337 retained as an independent external validation set. Variables with missing rates exceeding 30% were excluded, and remaining missing data were imputed using multiple imputation by chained equations (MICE). Thirteen candidate predictors were preselected via univariate screening and least absolute shrinkage and selection operator (LASSO) regression. Nine machine learning algorithms were developed and comparatively evaluated using area under the receiver operating characteristic curve (AUC), calibration plots, and decision curve analysis. Model interpretability was achieved through SHapley Additive exPlanations (SHAP). The primary outcome was defined as hemoglobin levels < 100 g/L (CTCAE Grade ≥ 2) recorded during the first two cycles of chemotherapy. Results: Among the nine candidate models, LightGBM achieved the highest discriminative performance, with AUCs of 0.871 (95% CI: 0.852-0.891) in the training set, 0.797 (95% CI: 0.763-0.831) in internal validation, and 0.684 (95% CI: 0.626-0.742) in the external validation set derived from Linfen Central Hospital. Calibration and decision curve analyses consistently demonstrated superior agreement and net clinical benefit for LightGBM across all three datasets. SHAP-based interpretation identified lymphocyte count, D-dimer, alanine aminotransferase, total bilirubin, sex, and albumin as the six most influential predictors, with D-dimer, female sex, and outpatient admission positively associated with anemia risk, whereas lymphocyte count, liver function indices, and albumin showed inverse associations. Conclusions: The LightGBM-based model developed herein demonstrates acceptable and moderate predictive performance, satisfactory calibration, and potential clinical utility across geographically diverse populations, offering a preliminary risk-stratification tool for early identification of lung cancer patients at elevated anemia risk prior to chemotherapy initiation. However, given the modest external validation performance, cautious interpretation and further refinement are warranted before widespread clinical deployment.

pubmed:42876835Useful?👍👎
97%empirical studypubmed

MRI-based preoperative WHO grade prediction in meningioma: development and comparison of deep learning, radiomics, clinical, and combined models in multicenter data.

Huryol C, Sulaimanov U, Yuce M et al. · J Neurooncol

External validation 97%
Abstract

Purpose: The objective of this study was to develop and externally validate complementary magnetic resonance imaging (MRI)-based models and their stacked combinations for preoperative World Health Organization (WHO) grading of intracranial meningioma. Methods: This retrospective multicenter study included 455 histopathologically confirmed meningiomas: a four-center development cohort (n = 346) with leave-one-center-out cross-validation and an external cohort (n = 109). Four base models used contrast-enhanced T1-weighted MRI: tumor + peritumoral radiomics, an nnU-Net segmentation-based classifier, frozen DINOv3 transfer-learning features, and clinical variables. All 15 combinations were prespecified and stacked using a linear meta-learner trained on development out-of-fold predictions. Frozen models were externally evaluated without modification. Results: WHO 2-3 tumors comprised 24.6% overall (112/455; development 20.5%; external 37.6%). External AUCs were 0.732 for nnU-Net, 0.703 for DINOv3, 0.645 for clinical, 0.628 for radiomics. The multimodal ensemble (nnU-Net+DINOv3+Clinical) achieved the highest external AUC (0.742), exceeding radiomics (ΔAUC +0.114, p = 0.008) but not nnU-Net (ΔAUC +0.011, p = 0.737). Compared with the clinical model, discrimination was higher but nonsignificant at the prespecified threshold (ΔAUC +0.098, p = 0.050), while reclassification improved (IDI +0.109, p < 0.001). Radiomics-containing combinations performed strongly in development but lost most discrimination externally. The multimodal ensemble had an external calibration slope of 1.32 (Brier 0.190) and net benefit above default strategies at thresholds ≥ 0.23. Conclusion: The multimodal ensemble achieved the highest external AUC but did not significantly exceed nnU-Net, which was the most transportable single predictor of meningioma grade. Clinical variables did not improve discrimination but enabled interpretable feature-level attribution. Handcrafted radiomics lacked external transportability.

pubmed:42875623Useful?👍👎
96%applicationpubmed

Dynamic machine-learning model for early prediction of intraoperative hypotension using 5-minute perioperative time-series data: a multicenter retrospective study.

Long B, Ye Y, Xing H et al. · Front Med (Lausanne)

External validation 96%
Abstract

Background: Intraoperative hypotension (IOH) is a common and potentially preventable complication strongly associated with postoperative acute kidney injury, myocardial injury, and mortality. Current approaches to IOH management remain largely reactive, and existing prediction tools have variable clinical utility. This study aimed to develop and externally validate a dynamic machine-learning model using routinely collected perioperative data to perform one-step-ahead prediction of intraoperative hypotension on a regularized 5-minute intraoperative grid. Methods: This retrospective multicenter study included 702 adults undergoing non-cardiac surgery under general anesthesia for model development and internal validation and an independent external cohort of 248 patients. A dynamic prediction framework was constructed using routinely collected preoperative variables and intraoperative 5-minute time-series data. Individualized baseline features and temporal predictors were derived from rolling observation windows. Four machine-learning algorithms were compared using a fully nested grouped cross-validation framework with external validation. Model performance was assessed by discrimination, calibration, decision-curve analysis, and SHapley Additive exPlanations (SHAP)-based interpretability. Results: All four machine-learning models demonstrated good discrimination in the primary fully nested case-grouped internal validation, with AUROC values ranging from 0.842 to 0.857. Random forest achieved the highest AUROC (0.857, 95% CI 0.841-0.868), the highest AUPRC (0.413, 95% CI 0.367-0.452), and extra trees achieved the lowest Brier score (0.093, 95% CI 0.088-0.098). In the independent external validation cohort, random forest remained the best-performing model, yielding an AUROC of 0.894 (95% CI 0.875-0.907), an AUPRC of 0.540 (95% CI 0.457-0.596), and a Brier score of 0.092 (95% CI 0.083-0.102). SHAP analysis consistently identified MAP-derived features, including current MAP, recent hypotensive burden, recent MAP measurements, relative MAP reduction, and MAP variability, as the most influential predictors across all four models. Conclusions: A dynamic machine-learning model using routinely collected perioperative time-series data accurately predicted MAP <65 mmHg at the next scheduled 5-minute intraoperative time point in an independent external cohort. These findings support further evaluation of this short-horizon risk stratification model in prospective clinical workflow studies.

pubmed:42876673Useful?👍👎
96%new methodpubmed

Development and external validation of an AI pipeline for automated estimation of a radiographic DMFT (rDMFT) score from panoramic radiographs: a feasibility study.

Saravi B, Shavlokhova V, Türky A et al. · Clin Oral Investig

External validation 96%
Abstract

Objectives: To assess the feasibility of estimating a radiographic Decayed-Missing-Filled-Teeth score (rDMFT), a proxy for the clinical DMFT index, from a single panoramic radiograph with a position-aware deep-learning pipeline. Materials And Methods: A tooth-status detector and a tooth-numbering detector (32 FDI positions), trained on DENTEX 2023, were combined in a position-aware read-out (one tooth per FDI position, third molars excluded, missing teeth = 28 - occupied positions) and validated on 100 panoramic radiographs from an independent hospital against a two-dentist, radiograph-based reference (intraclass correlation coefficient, ICC; mean absolute error, MAE; Bland-Altman analysis). Results: Against the reference, the pipeline reached an ICC of 0.84 (95% CI 0.74 to 0.90) and an MAE of 2.38, below the between-dentist agreement in point estimate (ICC 0.88, MAE 2.13), with larger errors against each dentist alone (MAE 3.00 and 2.73) and a bias of + 1.14 units from caries over-detection; agreement was highest for filled (r 0.90) and lowest for decayed teeth (r 0.34; dentists 0.16). In the 26 radiographs with missing teeth the missing count was exact in 42% (62% within ± 1 tooth), and missing teeth were over-called in 15 of 74 complete dentitions; tooth loss was no longer overlooked (26 of 26 detected), but the overall ICC was 0.84 versus 0.90 without numbering. Conclusions: Automated rDMFT estimation is feasible, but agreement was lower in point estimate than between two dentists, with larger errors against each dentist. The missing component now responds to actual tooth loss but remains imprecise and is over-called in some complete dentitions; the decayed component is unreliable. The pipeline is a research building block, not a decision-support or triage tool. Clinical Relevance: rDMFT is a radiographic proxy, not a clinical measure, and the pipeline is not proposed for clinical use; any application would first require validation in unselected cohorts against clinically determined reference standards.

pubmed:42875660Useful?👍👎

Maybe 90% to 95%

94%new methodpubmed

Preoperative 3D morphological phenotyping of hepatocellular carcinoma via a foundation model: a non-invasive biomarker for recurrence risk stratification.

Wang H, Zhou X, Zhang K et al. · eGastroenterology

External validation 94%
Abstract

Background: Imaging features play a central role in hepatocellular carcinoma (HCC) staging, but current systems remain limited in prognostic precision and treatment guidance. Pathological gross classification, which categorises HCC into four subtypes based on tumour margin morphology, represents a morphological surrogate of aggressive tumour behaviour encompassing histological and molecular features and has demonstrated value in predicting prognosis and guiding adjuvant locoregional therapy selection. Importantly, gross classification is assessable through imaging, but its evaluation utterly depends on postoperative pathology and remains subjective, time-consuming and poorly reproducible. We aimed to develop a three-dimensional (3D) Foundation Model-driven system to automatically perform non-invasive morphological phenotyping and to evaluate its prognostic utility. Methods: A cohort of 551 patients who underwent hepatectomy after gadoxetic acid-enhanced MRI from two medical centres was retrospectively analysed. Pathological gross classification served as the reference standard. The 3D MorphStratify Model was built to automatically phenotype 3D gross classification with a dedicated 3D Foundation Model encoder and a channel-aware fusion module. A combined model integrating 3D MorphStratify and Conventional Imaging Predictors (Morph-CIP) was constructed and validated for recurrence risk stratification. The biological rationale linking imaging morphological phenotyping to underlying biology was preliminarily explored. Results: Eligible patients were divided into a development dataset (n=291), a validation dataset (n=192) and an external test set (n=68). The 3D MorphStratify Model achieved a micro-averaged area under the receiver operating characteristic curve (AUC) of 0.932, significantly outperforming senior radiologists (AUC 0.825) with about 40-fold improved efficiency. The imaging-based 3D morphological phenotyping (3D MorphStratify) independently predicted poor recurrence-free survival (RFS, HR 2.16, 95% CI 1.20 to 3.87, p=0.010). The Morph-CIP Model enables risk stratification through training set (AUC 0.836, 0.768, 0.765 for 1-year, 2-year, 3-year RFS), internal test set (AUC 0.816, 0.690, 0.711) and external test set (AUC 0.737, 0.709, 0.702). The high-risk group is characterised by the enrichment of glycolysis and hypoxia signalling pathways. Conclusion: 3D MorphStratify is the first automated 3D morphological phenotyping system for HCC, transforming subjective pathological gross classification into an objective, non-invasive imaging biomarker. The integration of 3D MorphStratify with conventional imaging predictors enables recurrence risk stratification, potentially providing complementary information for prognostic evaluation.

pubmed:42876796Useful?👍👎
93%applicationpubmed

Federated learning for privacy-preserving opportunistic screening of lumbar-spine DXA-defined osteoporotic-level bone mineral density using chest radiographs: A multi-center independent validation study.

Lin BR, Huang MY, Sun WC et al. · Osteoporos Sarcopenia

External validation 93%
Abstract

Objectives: To evaluate the performance of an artificial intelligence (AI) system trained via federated learning for opportunistic screening of lumbar-spine DXA-defined osteoporotic-level bone mineral density (T-score ≤ -2.5) using routine chest X-rays (CXRs) in a multi-center independent validation setting. Methods: A deep learning model was developed via privacy-preserving federated learning on 5943 paired CXR and dual-energy X-ray absorptiometry (DXA) examinations and validated on an independent dual-center cohort of 3007 adults undergoing same-day CXR and DXA. Ground truth was a lumbar spine DXA T-score ≤ -2.5. The primary metric was AUROC, alongside sensitivity and specificity. Image-only and clinical-only ablation models were evaluated on the same cohort to disentangle imaging from demographic contributions. Results: Among 3007 validation cases, 200 (6.7%) had a T-score ≤ -2.5. The AI achieved an AUROC of 0.942 (95% CI, 0.923-0.962), with sensitivity of 91.0% and specificity of 82.7%, and performance was preserved across study sites, sexes, and the clinically relevant older stratum (≥60 years). In ablation analysis, the image-only model achieved AUROC 0.931 (95% CI 0.912-0.950) and the clinical-only baseline 0.780 (0.732-0.827); non-overlapping 95% CIs (image-only higher) support an independent imaging contribution beyond demographics. Conclusions: This federated learning-based AI demonstrates high discrimination for identifying lumbar-spine DXA-defined osteoporotic-level bone mineral density (T-score ≤ -2.5) from standard CXRs and shows temporal transportability across two institutions without centralizing raw imaging data. Positioned as a triage adjunct to confirmatory DXA, it offers a scalable, privacy-preserving opportunistic screening solution.

pubmed:42877638Useful?👍👎
92%applicationpubmed

Prediction of cognitive impairment in Parkinson's disease using TabPFN: an integrative analysis of clinical data, longitudinal trajectories, and lipidomics.

Zhou Z, Liu J, Wang L et al. · Front Aging Neurosci

External validation 92%
Abstract

Background: Cognitive impairment is a common and disabling non-motor manifestation of Parkinson's disease (PD). Early identification of patients at high risk remains challenging, and the metabolic mechanisms underlying cognitive decline are not fully understood. Methods: We conducted a retrospective cohort study including PD patients who were cognitively normal at baseline. A machine learning model based on a Tabular Prior-data Fitted Network (TabPFN) was developed using routinely collected clinical and laboratory data to predict future cognitive impairment. Model performance was evaluated using stratified group cross-validation and external validation in the Parkinson's Progression Markers Initiative (PPMI) cohort. Model interpretability was assessed using SHapley Additive exPlanations (SHAP). Longitudinal analyses and untargeted lipidomics were performed to explore temporal and molecular alterations associated with cognitive decline. Results: Among 91 patients in the internal cohort, 45 developed cognitive impairment during follow-up. The TabPFN model achieved an AUC of 0.822 (95% CI 0.709-0.889) in internal validation and 0.742 (95% CI 0.695-0.783) in external validation. In internal benchmark comparisons, TabPFN showed numerically higher discrimination than logistic regression (AUC = 0.728) and random forest (AUC = 0.787). MoCA and age were the most influential predictors, while triglycerides (TG) also contributed to model predictions. In the longitudinal analysis, TG trajectories differed between converters and stable participants after adjustment for relevant covariates (group-by-time interaction: β = -0.146, 95% CI - 0.248 to -0.044; p = 0.005). In the independent lipidomics cohort, although total TG abundance did not differ significantly between cognitive groups, several individual lipid species, including specific TG species, showed differential abundance. Conclusion: A TabPFN-based model using routinely available clinical and biochemical variables showed promising discrimination for future cognitive impairment in PD. TG contributed to prediction, and longitudinal analyses identified different TG trajectories between converters and stable participants. The cross-sectional lipidomics findings provide complementary, hypothesis-generating information about molecular lipid heterogeneity but do not establish the mechanism underlying the longitudinal TG pattern. Prospective multicenter validation is required before clinical implementation.

pubmed:42877199Useful?👍👎
91%applicationpubmed

Multimodal data-driven clustering analysis of heart failure patients identifies two distinct patterns of heart failure with preserved ejection fraction: Results from the PACIFIC-PRESERVED study.

Hulot JS, Hervé PY, Girerd N et al. · Nat Commun

External validation 91%Prospective 35%
Abstract

Heart failure with preserved ejection fraction (HFpEF) accounts for over half of heart failure cases but remains poorly defined due to its clinical heterogeneity. In the prospective PACIFIC-Preserved cohort (NCT04189029, n = 155), we applied multimodal deep phenotyping, including high-throughput proteomics, and unsupervised machine learning to identify biologically distinct HFpEF subgroups. Multiview clustering revealed two major HFpEF phenogroups: PEF1, characterized by inflammatory signaling, TNF receptor activation, cardio-skeletal injury, and greater renal dysfunction; and PEF2, marked by endothelial stress and milder perturbations. Conventional diagnostics alone could not reliably distinguish these subgroups, but a multimodal classifier integrating clinical, imaging, and proteomic variables achieved high predictive accuracy (F1-score 0.87). External validation in the MEDIA-DHF cohort (n = 456) confirmed that PEF1 was independently associated with adverse outcomes (adjusted HR 2.27, 95% CI 1.04-4.94). These findings establish a classifier-driven, biologically informed stratification of HFpEF, providing a framework for precision medicine in heart failure.

pubmed:42875459Useful?👍👎
90%applicationpubmed

Immunogenic cell death and tertiary lymphoid structures jointly define dysregulated antitumor immune states and therapeutic vulnerability in lung adenocarcinoma.

Lu Y, Sun Y, Meng Y et al. · Front Immunol

External validation 90%
Abstract

Background: Immunogenic cell death (ICD) and tertiary lymphoid structures (TLSs) are biologically distinct yet interconnected components of antitumor immunity. ICD promotes danger-associated immune activation, whereas TLSs organize local adaptive immune responses. However, how these processes jointly affect immune heterogeneity, prognosis, and therapeutic responsiveness in lung adenocarcinoma (LUAD) remains unclear. Methods: To define the coordinated roles of TLS- and ICD-related programs in LUAD, we used a multi-cohort and multi-layer analytical framework. This framework included transcriptomic analysis, Mendelian randomization, consensus machine-learning prognostic modeling, immune landscape characterization, single-cell RNA sequencing, multiplex immunohistochemistry, immunotherapy response assessment, exploratory drug screening, structural analyses, and multilayer network topology analysis. Results: TLS- and ICD-associated genes were transcriptionally dysregulated in LUAD. By integrating 13 machine-learning algorithms, we developed 801 candidate prognostic models and identified optimal TLS- and ICD-related models that stratified patients effectively into high- and low-risk groups. These models showed strong performance in TCGA and remained robust across six external cohorts. Low-risk tumors had higher TLS+ICD scores than high-risk tumors. Immune landscape analysis indicated that low-risk tumors had elevated immune scores, enhanced antigen presentation, cytotoxic T/NK-cell signatures, checkpoint activation, and lower Tumor Immune Dysfunction and Exclusion (TIDE) scores, suggesting a more immunotherapy-responsive microenvironment. Consistently, higher TLS+ICD scores correlated with improved survival and greater immunotherapy responsiveness in independent cohorts. Mendelian randomization and survival analyses prioritized CD40, CD5, and GFI1 as candidate TLS-ICD immune-regulatory genes, with single-cell and mIHC analyses defining their major cellular origins, spatial protein phenotypes, and prognostic relevance. Drug prediction, molecular docking, and molecular dynamics simulations identified CAY10576, SCH772984, and SZ4TA2 as potential therapeutic agents for high-risk LUAD. Multilayer gene regulatory network reconstruction and GLMY homology analysis revealed progressive disruption of higher-order immune-regulatory organization from normal to tumor tissues and between low TLS-risk/low ICD-risk (LL-risk) and high TLS-risk/high ICD-risk (HH-risk) states. Conclusions: TLS- and ICD-related programs jointly delineate clinically significant immune states in LUAD through convergent transcriptomic, genetic, single-cell, spatial, pharmacological, and systems-level evidence, and are associated with immune microenvironment remodeling, immunotherapy responsiveness, prognosis, and therapeutic vulnerability. These findings establish a biomarker-guided, machine learning-supported framework for LUAD risk stratification and may inform more precise immunotherapy-oriented therapeutic strategies.

pubmed:42877251Useful?👍👎